EpiRAD(2) •
Moorea(18) •
Pipeline(1) •
Pocillopora(1) •
SNP(9) •
assembly(3) •
cluster(2) •
correlation(1) •
dDocent(10) •
ddRAD(18) •
epiRAD(11) •
filter(10) •
mapping(1) •
methylation(4) •
outliers(2)
EpiRAD 2
- Mo'orea Project Background • February 6, 2020
- Pipeline for clean up of data • February 11, 2020
Moorea 18
- Comparison of results for epiRAD data filtered in three steps • June 4, 2020
- Comparison of results for epiRAD data per cluster, post removal of problematic loci from technical reps. • July 30, 2020
- Comparison of results for filtered epiRAD data without outliers • June 25, 2020
- Comparison of results for filtered epiRAD data without outliers identified by DAPC • July 16, 2020
- Complete ddARD analysis of clusters identified from full ddRAD data set • August 4, 2020
- Correlation of ddRAD and epiRAD data • March 24, 2020
- Mo'orea Project Background • February 6, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
- Pipeline for clean up of data • February 11, 2020
- Running dDocent with a all samples • March 18, 2020
- Running dDocent with a subsample • February 17, 2020
- Running dDocent with a subsample2 • February 27, 2020
- SNP filtering ddRAD data set post trimming, assembly and mapping • May 13, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering subset data • February 21, 2020
- ddRAD data analysis for filtered SNPs • July 1, 2020
- ddRAD data analysis for filtered SNPs in sample subgroups • July 10, 2020
Pipeline 1
- Pipeline for clean up of data • February 11, 2020
Pocillopora 1
- Mo'orea Project Background • February 6, 2020
SNP 9
- Complete ddARD analysis of clusters identified from full ddRAD data set • August 4, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
- Running dDocent with a all samples • March 18, 2020
- SNP filtering ddRAD data set post trimming, assembly and mapping • May 13, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering subset data • February 21, 2020
- ddRAD data analysis for filtered SNPs • July 1, 2020
- ddRAD data analysis for filtered SNPs in sample subgroups • July 10, 2020
assembly 3
- Running dDocent with a all samples • March 18, 2020
- Running dDocent with a subsample • February 17, 2020
- Running dDocent with a subsample2 • February 27, 2020
cluster 2
- Comparison of results for epiRAD data per cluster, post removal of problematic loci from technical reps. • July 30, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
correlation 1
- Correlation of ddRAD and epiRAD data • March 24, 2020
dDocent 10
- Complete ddARD analysis of clusters identified from full ddRAD data set • August 4, 2020
- Correlation of ddRAD and epiRAD data • March 24, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
- Running dDocent with a all samples • March 18, 2020
- Running dDocent with a subsample • February 17, 2020
- Running dDocent with a subsample2 • February 27, 2020
- SNP filtering ddRAD data set post trimming, assembly and mapping • May 13, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering subset data • February 21, 2020
ddRAD 18
- Comparison of results for epiRAD data filtered in three steps • June 4, 2020
- Comparison of results for epiRAD data per cluster, post removal of problematic loci from technical reps. • July 30, 2020
- Comparison of results for filtered epiRAD data without outliers • June 25, 2020
- Comparison of results for filtered epiRAD data without outliers identified by DAPC • July 16, 2020
- Complete ddARD analysis of clusters identified from full ddRAD data set • August 4, 2020
- Correlation of ddRAD and epiRAD data • March 24, 2020
- Mo'orea Project Background • February 6, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
- Pipeline for clean up of data • February 11, 2020
- Running dDocent with a all samples • March 18, 2020
- Running dDocent with a subsample • February 17, 2020
- Running dDocent with a subsample2 • February 27, 2020
- SNP filtering ddRAD data set post trimming, assembly and mapping • May 13, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering subset data • February 21, 2020
- ddRAD data analysis for filtered SNPs • July 1, 2020
- ddRAD data analysis for filtered SNPs in sample subgroups • July 10, 2020
epiRAD 11
- Comparison of results for epiRAD data filtered in three steps • June 4, 2020
- Comparison of results for epiRAD data per cluster, post removal of problematic loci from technical reps. • July 30, 2020
- Comparison of results for filtered epiRAD data without outliers • June 25, 2020
- Comparison of results for filtered epiRAD data without outliers identified by DAPC • July 16, 2020
- Complete ddARD analysis of clusters identified from full ddRAD data set • August 4, 2020
- Correlation of ddRAD and epiRAD data • March 24, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
- Running dDocent with a all samples • March 18, 2020
- SNP filtering ddRAD data set post trimming, assembly and mapping • May 13, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering full data set • April 30, 2020
filter 10
- Comparison of results for epiRAD data filtered in three steps • June 4, 2020
- Comparison of results for epiRAD data per cluster, post removal of problematic loci from technical reps. • July 30, 2020
- Comparison of results for filtered epiRAD data without outliers • June 25, 2020
- Comparison of results for filtered epiRAD data without outliers identified by DAPC • July 16, 2020
- Complete ddARD analysis of clusters identified from full ddRAD data set • August 4, 2020
- Modified pipeline for identification of clusters and cluster specific analysis • November 1, 2020
- SNP filtering ddRAD data set post trimming, assembly and mapping • May 13, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering full data set • April 30, 2020
- SNP filtering subset data • February 21, 2020
mapping 1
- Running dDocent with a all samples • March 18, 2020
methylation 4
- Comparison of results for epiRAD data filtered in three steps • June 4, 2020
- Comparison of results for epiRAD data per cluster, post removal of problematic loci from technical reps. • July 30, 2020
- Comparison of results for filtered epiRAD data without outliers • June 25, 2020
- Comparison of results for filtered epiRAD data without outliers identified by DAPC • July 16, 2020